Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015905605.1_cds_XP_016455865.1_49756
CDS Infomation

[gene=LOC107779877] [db_xref=GeneID:107779877] [protein=probable protein phosphatase 2C 38 isoform X2] [protein_id=XP_016455865.1] [location=join(24823..25162,36364..36731,36852..37088,39852..40064)] [gbkey=CDS]
Sequence

ATGGTGACAACTACATGGAAAAAGTTTGTATACCCTTGTTGGAAGCCTTCTATAAATAAT
GAAGGTGAAAATAGCAATAGTAGAGGAGGAGACCAAGATCCGGACGGCAGTGTTGATGGA
TTGTGGTGGTATAAAGATTCGGGACACCATGTTAATGGGGAGTTCTCGATGGCTGTAATT
CAAGCGAATAACACATTGGAGGATCACAGTCAGCTTGAATCGGGGCCGATGAGTTCGGTC
AACACAGGTCTTCAGGGCACCTTTGTGGGAATATATGATGGCCATGCAGGTGCAGAAGCT
GCCCGGTTTATAAATGACCGCCTGTTCAAGAACGTCAAGAAATTCACCTCAGAGGATCAA
GTTATGTCAGCCGACGTTATAAGCAAGGCATATTTGGAAACAGAAGAGGAGTTCCTTTCT
TTAGTGAGAAAGCAATGGCAAACTAAACCCCAAATTGCTTCTGCGGGATCATGCTGCTTA
GTGGGTATTATATGCAGTGGGATATTATACATCGCAAATGCTGGAGATTCTCGTGCGGTG
TTAGGGAAACGGGAGAGGGCTATGAAAGAGGTCAAAGCAATTCAATTGTCTTCTGAACAC
AATGCGAGTTTGGCGTCTGTCCGTGAGGAACTGCGTTCACTGCATCCTGATGATCCGCAT
GTAGTAGTTTTAAAGCACAAGGTTTGGCGCGTGAAGGGAATTATACAGGTGTCAAGATCA
ATTGGTGATGCATATTTGAAGAGAGCAGAGTTTAACAGAGAGCCTTTGCTCCCTAAATTT
CGATTTCCTGGAACCTTCCTGAAGCCAATTCTCCTAGCTGAGCCATCAATATTTGTACAG
AAGCTCCTTCCAGAAGATCAGTTTCTCATATTTGCGTCTGATGGCTTATGGGAGCATCTA
AGCAATCAAGAGGCCGTGGACATTGTCAGTCGTTGTGAACACCATGGAATTGCTAGAAAA
CTCGTAAAAGCTGCTCTTCAGGAAGCAGCAAAGAAAAGAGAAATGAGATATGCAGACCTG
AAAAGGATAGATAGAGGAGTGAGGCGACATTTTCATGACGATATCACGGTCATAGTTTTG
TTTCTAGATTCTCATTTGATTAGTCGCAGTTCCTTCCATGCGCCGGTGGTTTCTATAAAA
GCAAGTGGTGGTCCTTGA

Peptide Sequence

PEP ID

XP_016455865.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 38 isoform X2 [Nicotiana tabacum]
Sequence

MVTTTWKKFVYPCWKPSINNEGENSNSRGGDQDPDGSVDGLWWYKDSGHHVNGEFSMAVI
QANNTLEDHSQLESGPMSSVNTGLQGTFVGIYDGHAGAEAARFINDRLFKNVKKFTSEDQ
VMSADVISKAYLETEEEFLSLVRKQWQTKPQIASAGSCCLVGIICSGILYIANAGDSRAV
LGKRERAMKEVKAIQLSSEHNASLASVREELRSLHPDDPHVVVLKHKVWRVKGIIQVSRS
IGDAYLKRAEFNREPLLPKFRFPGTFLKPILLAEPSIFVQKLLPEDQFLIFASDGLWEHL
SNQEAVDIVSRCEHHGIARKLVKAALQEAAKKREMRYADLKRIDRGVRRHFHDDITVIVL
FLDSHLISRSSFHAPVVSIKASGGP

Transcript Sequence

Gene sequence data has not been registered.